[bsmap] @Mon Dec 28 12:32:49 2020 	loading reference file: /sibcb2/bioinformatics/iGenome/Bismark/hg19/hg19.fa 	(format: FASTA)
[bsmap] @Mon Dec 28 12:33:08 2020 	93 reference seqs loaded, total size 3137161264 bp. 19 secs passed
[bsmap] @Mon Dec 28 12:33:49 2020 	create seed table. 60 secs passed
[bsmap] @Mon Dec 28 12:33:49 2020 	Pair-end alignment(8 threads),
	Input read file #1: RRBS20A041523_R1_val_1.fq.gz 	(format: gzipped FASTQ)
	Input read file #2: RRBS20A041523_R2_val_2.fq.gz 	(format: gzipped FASTQ)
	Output: STDOUT	 (format: SAM)
[bsmap] @Mon Dec 28 14:57:59 2020 	total read pairs: 48129116 	total time consumed:  8710 secs
	aligned pairs: 35214089 (73.2%), unique pairs: 35214089 (73.2%), suppressed non-unique pairs: 5471650 (11.4%)
	unpaired read #1: 2215308 (4.6%), unique reads: 2215308 (4.6%), suppressed non-unique reads: 6779145 (14.1%)
	unpaired read #2: 1625303 (3.4%), unique reads: 1625303 (3.4%), suppressed non-unique reads: 6876182 (14.3%)