[bsmap] @Mon Dec 28 11:39:12 2020 	loading reference file: /sibcb2/bioinformatics/iGenome/Bismark/hg19/hg19.fa 	(format: FASTA)
[bsmap] @Mon Dec 28 11:39:32 2020 	93 reference seqs loaded, total size 3137161264 bp. 20 secs passed
[bsmap] @Mon Dec 28 11:40:11 2020 	create seed table. 59 secs passed
[bsmap] @Mon Dec 28 11:40:11 2020 	Pair-end alignment(8 threads),
	Input read file #1: RRBS20A041593_R1_val_1.fq.gz 	(format: gzipped FASTQ)
	Input read file #2: RRBS20A041593_R2_val_2.fq.gz 	(format: gzipped FASTQ)
	Output: STDOUT	 (format: SAM)
[bsmap] @Mon Dec 28 12:15:10 2020 	total read pairs: 9974709 	total time consumed:  2158 secs
	aligned pairs: 6876795 (68.9%), unique pairs: 6876795 (68.9%), suppressed non-unique pairs: 1386287 (13.9%)
	unpaired read #1: 505494 (5.1%), unique reads: 505494 (5.1%), suppressed non-unique reads: 1735596 (17.4%)
	unpaired read #2: 360694 (3.6%), unique reads: 360694 (3.6%), suppressed non-unique reads: 1763898 (17.7%)