[bsmap] @Mon Dec 28 11:48:35 2020 	loading reference file: /sibcb2/bioinformatics/iGenome/Bismark/hg19/hg19.fa 	(format: FASTA)
[bsmap] @Mon Dec 28 11:48:55 2020 	93 reference seqs loaded, total size 3137161264 bp. 20 secs passed
[bsmap] @Mon Dec 28 11:49:34 2020 	create seed table. 59 secs passed
[bsmap] @Mon Dec 28 11:49:34 2020 	Pair-end alignment(8 threads),
	Input read file #1: RRBS20A041594_R1_val_1.fq.gz 	(format: gzipped FASTQ)
	Input read file #2: RRBS20A041594_R2_val_2.fq.gz 	(format: gzipped FASTQ)
	Output: STDOUT	 (format: SAM)
[bsmap] @Mon Dec 28 12:45:42 2020 	total read pairs: 17579153 	total time consumed:  3427 secs
	aligned pairs: 12710703 (72.3%), unique pairs: 12710703 (72.3%), suppressed non-unique pairs: 2218712 (12.6%)
	unpaired read #1: 734184 (4.2%), unique reads: 734184 (4.2%), suppressed non-unique reads: 2745336 (15.6%)
	unpaired read #2: 539824 (3.1%), unique reads: 539824 (3.1%), suppressed non-unique reads: 2787166 (15.9%)