[bsmap] @Mon Dec 28 17:20:25 2020 	loading reference file: /sibcb2/bioinformatics/iGenome/Bismark/hg19/hg19.fa 	(format: FASTA)
[bsmap] @Mon Dec 28 17:20:48 2020 	93 reference seqs loaded, total size 3137161264 bp. 23 secs passed
[bsmap] @Mon Dec 28 17:21:54 2020 	create seed table. 89 secs passed
[bsmap] @Mon Dec 28 17:21:54 2020 	Pair-end alignment(8 threads),
	Input read file #1: RRBS20A041598_R1_val_1.fq.gz 	(format: gzipped FASTQ)
	Input read file #2: RRBS20A041598_R2_val_2.fq.gz 	(format: gzipped FASTQ)
	Output: STDOUT	 (format: SAM)
[bsmap] @Mon Dec 28 20:29:38 2020 	total read pairs: 44492996 	total time consumed:  11353 secs
	aligned pairs: 31517437 (70.8%), unique pairs: 31517437 (70.8%), suppressed non-unique pairs: 5739300 (12.9%)
	unpaired read #1: 2302332 (5.2%), unique reads: 2302332 (5.2%), suppressed non-unique reads: 7131439 (16.0%)
	unpaired read #2: 1409033 (3.2%), unique reads: 1409033 (3.2%), suppressed non-unique reads: 7209586 (16.2%)