[bsmap] @Mon Dec 28 11:43:59 2020 	loading reference file: /sibcb2/bioinformatics/iGenome/Bismark/hg19/hg19.fa 	(format: FASTA)
[bsmap] @Mon Dec 28 11:44:19 2020 	93 reference seqs loaded, total size 3137161264 bp. 20 secs passed
[bsmap] @Mon Dec 28 11:45:04 2020 	create seed table. 65 secs passed
[bsmap] @Mon Dec 28 11:45:04 2020 	Pair-end alignment(8 threads),
	Input read file #1: RRBS20A041605_R1_val_1.fq.gz 	(format: gzipped FASTQ)
	Input read file #2: RRBS20A041605_R2_val_2.fq.gz 	(format: gzipped FASTQ)
	Output: STDOUT	 (format: SAM)
[bsmap] @Mon Dec 28 12:24:45 2020 	total read pairs: 13818816 	total time consumed:  2446 secs
	aligned pairs: 9884298 (71.5%), unique pairs: 9884298 (71.5%), suppressed non-unique pairs: 1869888 (13.5%)
	unpaired read #1: 650061 (4.7%), unique reads: 650061 (4.7%), suppressed non-unique reads: 2278233 (16.5%)
	unpaired read #2: 385769 (2.8%), unique reads: 385769 (2.8%), suppressed non-unique reads: 2283481 (16.5%)