[bsmap] @Mon Dec 28 11:51:24 2020 	loading reference file: /sibcb2/bioinformatics/iGenome/Bismark/hg19/hg19.fa 	(format: FASTA)
[bsmap] @Mon Dec 28 11:51:44 2020 	93 reference seqs loaded, total size 3137161264 bp. 20 secs passed
[bsmap] @Mon Dec 28 11:52:27 2020 	create seed table. 63 secs passed
[bsmap] @Mon Dec 28 11:52:27 2020 	Pair-end alignment(8 threads),
	Input read file #1: RRBS20A041630_R1_val_1.fq.gz 	(format: gzipped FASTQ)
	Input read file #2: RRBS20A041630_R2_val_2.fq.gz 	(format: gzipped FASTQ)
	Output: STDOUT	 (format: SAM)
[bsmap] @Mon Dec 28 13:15:15 2020 	total read pairs: 18073198 	total time consumed:  5031 secs
	aligned pairs: 12037926 (66.6%), unique pairs: 12037926 (66.6%), suppressed non-unique pairs: 2187425 (12.1%)
	unpaired read #1: 1032750 (5.7%), unique reads: 1032750 (5.7%), suppressed non-unique reads: 2800135 (15.5%)
	unpaired read #2: 935476 (5.2%), unique reads: 935476 (5.2%), suppressed non-unique reads: 2918025 (16.1%)