[bsmap] @Wed Dec 16 14:32:32 2020 	loading reference file: /sibcb2/bioinformatics/iGenome/Bismark/hg19/hg19.fa 	(format: FASTA)
[bsmap] @Wed Dec 16 14:32:52 2020 	93 reference seqs loaded, total size 3137161264 bp. 20 secs passed
[bsmap] @Wed Dec 16 14:34:34 2020 	create seed table. 122 secs passed
[bsmap] @Wed Dec 16 14:34:34 2020 	Pair-end alignment(8 threads),
	Input read file #1: RRBS20A041690_R1_val_1.fq.gz 	(format: gzipped FASTQ)
	Input read file #2: RRBS20A041690_R2_val_2.fq.gz 	(format: gzipped FASTQ)
	Output: STDOUT	 (format: SAM)
[bsmap] @Wed Dec 16 17:01:55 2020 	total read pairs: 10651195 	total time consumed:  8963 secs
	aligned pairs: 7474591 (70.2%), unique pairs: 7474591 (70.2%), suppressed non-unique pairs: 1409299 (13.2%)
	unpaired read #1: 542472 (5.1%), unique reads: 542472 (5.1%), suppressed non-unique reads: 1786176 (16.8%)
	unpaired read #2: 361223 (3.4%), unique reads: 361223 (3.4%), suppressed non-unique reads: 1833729 (17.2%)